PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Traes_2BL_D0D6F6846.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bZIP
Protein Properties Length: 183aa    MW: 20415.2 Da    PI: 10.6413
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Traes_2BL_D0D6F6846.1genomeIWGSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_146.76.9e-1594140450
                            XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                 bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkele 50 
                            ++r+rr++kNRe+A rsR+RK+a++ eLe + ++L  eNk+L+++ +
  Traes_2BL_D0D6F6846.1  94 DRRQRRMIKNRESAARSRARKQAYTNELELELEQLRRENKMLIQREK 140
                            68****************************************97755 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003386.5E-1191155IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.5393138IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.3E-1295140No hitNo description
CDDcd147073.52E-1395119No hitNo description
SuperFamilySSF579591.38E-1095141No hitNo description
PfamPF001701.1E-1295140IPR004827Basic-leucine zipper domain
PROSITE patternPS00036098113IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 183 aa     Download sequence    Send to blast
MDELWKDMSL CSTPLALQSY RLHSPAVHPY RGAVYLQDCL AGANSVPQPP RTPPPPPPHT  60
ALSLEFTYLG GATSAANNSS RRSAVLQPAA VGGDRRQRRM IKNRESAARS RARKQAYTNE  120
LELELEQLRR ENKMLIQREK DFINDRQAKA AQLAVPDCRS GRSTASSLQL KQQQQRCRSA  180
PPP
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3758365e-53AK375836.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv3107H21.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003573205.11e-31PREDICTED: protein FD-like
SwissprotQ84JK27e-18FD_ARATH; Protein FD
TrEMBLW5BFL41e-132W5BFL4_WHEAT; Uncharacterized protein
STRINGMLOC_73626.11e-59(Hordeum vulgare)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP146021020
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G17770.22e-10basic region/leucine zipper motif 27
Publications ? help Back to Top
  1. Brenchley R, et al.
    Analysis of the bread wheat genome using whole-genome shotgun sequencing.
    Nature, 2012. 491(7426): p. 705-10
    [PMID:23192148]